SubtiBank SubtiBank
ytcI [2018-02-09T22:32:18.000Z]
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ytcI [2018-02-09T22:32:18.000Z]

similar to acetate-CoA ligase
locus
BSU29560
pI
6.18
mw
59.40 kDa
protein length
531 aa Sequence Blast
gene length
1593 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    3,023,677 → 3,025,266

    The protein

    Paralogous protein(s)

  • [protein|6671E7D85E99D349679F0E9D825DC035D10FFD2E|AcsA] (35,1%)

    • Structure

  • [PDB|3ETC] (from Methanosarcina Acetivorans 37% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|48538F67259B25B64A7BC4263E944C7074E8E1B3|ytcI]-[gene|DF51B9E50BD6C87C5FD1A48E15F281FC3A096D0A|ytcJ]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-A107 (ytcI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/107 NBRP B. subtilis, Japan]
  • BKE29560 (Δ[gene|48538F67259B25B64A7BC4263E944C7074E8E1B3|ytcI]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE29560 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACGAACAACTCCTCACTTT, downstream forward: _UP4_GCGTAAAGAAAGAGAGTGAA
  • BKK29560 (Δ[gene|48538F67259B25B64A7BC4263E944C7074E8E1B3|ytcI]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK29560 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACGAACAACTCCTCACTTT, downstream forward: _UP4_GCGTAAAGAAAGAGAGTGAA